Research Paper - Peptriever: A Protein Binding Search Engine

About Peptriver

I’m excited to share a recent research paper that I contributed to! We have trained a pair of language models to power a protein binding search engine, which we hope will accelerate biological research and the discovery of new drugs.

The evaluation results demonstrate that our bi-encoder approach is competitive with the best models for this task, such as AlphaFold-Multimer, while also enabling large-scale search.

The training code and model weights are available under a permissive MIT license

• Paper
• Preprint
• Codebase
• Model weights
• Official App Page

Demo